CDS
| Accession Number | TCMCG065C09077 |
| gbkey | CDS |
| Protein Id | XP_004960301.1 |
| Location | join(2494806..2494887,2494972..2495057,2495509..2495586,2495694..2495825,2496188..2496238,2496336..2496476,2496563..2496685,2496785..2496862,2497642..2497731,2497806..2497925,2498066..2498149,2498398..2498496,2498581..2498769,2499999..2500074,2500690..2500793,2500924..2501180,2501938..2502024,2502100..2502327,2502548..2502626,2502709..2502772,2502914..2503023) |
| Gene | LOC101755231 |
| GeneID | 101755231 |
| Organism | Setaria italica |
Protein
| Length | 785aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_004960244.3 |
| Definition | pre-rRNA-processing protein TSR1 homolog [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | AARP2CN (NUC121) domain |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGCGGGGGCCGCGCGCAGGTAAACAAGGCTCACAAGACCCGTTTCGCGTCCAAGGCGTCCCGCCACGCGCACAAGATCGATAAGGTCAGGAGCGGGAAGCCAGAGAGCAGCCACCGCGCCGCCGTCAAGGGTGCCCGCGCCGCGCGCATCCAACAGAGCAAGGCGATCCGTGATAAAAAACGTGCTGCTTTGCTGAAGGAGAAACGGTCATCTGTAGGATCTTCAGGCGCACCACGCGTCATTGTTCTTGTTGGATTATCTTCATCAACAGATGTTGGATCACTTGCCAAAGACCTTTTGACATTTGCAGAAGGAGATGATGGGAAACTGAGATCCTCTACTGTTGCTTCTCCTACTTATAAGCTTCGAACCACAGTACTGCAAGCGCCATATGGTGATCTTACCTCATGCATGGAACTTGCAAAGGTTGCTGATTTGTTGGCGTTCGTTCTACCAGCAAATTCATTGTACAGTAGTGATTCGAGCAGTCCAATTGATGAGTTTGGGTCGCAATGCCTATCGGTATTTCGGGCCATGGGCTTACCTAGTACAGCTGTTTTCATTCGAGATCTTCCAGCGGACAATAGAAGTAGGCAAGAATTGAAGAAAGCAGCAACTTCTTTCCTTTCTGCAGAGCTGCCTGAGGACTGCAAGTTTTACTTAGCAGACACAAAGGATGATCTGCATAAGTTCATGTGGCTTTTCAAGGAGCAGCATCTTTCATCACCACATTGGAGAAACCAGAGACCATATGTTATGTCTGAGCAGATCTGCATAAAACCTGATGACAATACGGGATTGTGCACACTTCTTGTGTCTGGGTATTTACGGGCCCATAATCTTTCAGTGAACCAGCTTGTCCATGTTTCAGGTGCTGGTGATTTTCAGTTAGGCCAAATTGATGTCCTCAAGGATCCATGTCCTCTTTGTGAGCGGAAAAGCTCTGATGTTATGGAAACAGAAGATGATGGAATTCAGATTGTTAACACCTTTGTTTCAGACCCTTCGAATCAGGAACCCTTACTTGTTGAAAATGTACCAGATCCTCTTGCTGGGGAGCAGACTTGGCCAACGGAAGAAGATATGAAAGAGGCCAACATAAACAACAAAGAGAGAAAATTGGTAAAGAGGAAGCTTCCCCGAGGCACTTCAGAATACCAGGCTGCTTGGATTGTTGATGATACAGATGATGAAGATAATGACTCCGATAATGACAACCAGGCTGGTTCTGGAATGGTCATCGATGAGCAAGGTCATGCAGATGAAGGAAGTGATGGTTCGGATATAGATGCAGTGTCTCACTTCACGGAAAAGTTTGATACAGAAACAGTTGGGGATACTGAGATGGCAGATGACGAAAATTTGACTAAAGAACAGATAGAAGCTGAGATTAAGAAAATCAAAGAAGCTAATACTGAAGATGAAGAATTTCCTGATGAGGTGGAGACGCCATTGGATGTTCCAGCAAAAAAACGGTTTGCAAAATACAGAGGACTAAAGTCATTTAGGACGTCAACCTGGGATCCTAAGGAATCATTGCCACCTGATTATGCAAGAATATTTGCATTTGATAACTTCACACGGACTCAAAAGCATGTCCTTGCAAAAATTGCCGAGCTAGATGGGGGAACAAAGGATTGTGCTCTTGTGGGATCGTATGTAAGGCTCTATGTGACAAACGTTCCTACTGATATTGCCTCCAAACTTTGTCATCCATCAAGAAGAATACCTGTGGTGGTTTCTGGTCTTCTTCAACATGAGTCGAAAATGTCAGTTCTTCACTTCAGCATAAAGAAACATGACTCATATGAAGCTCCTATCAAATCTAAGGAGCCGTTGATTTTCAATGTTGGATTCCGGCAATTCACAGCAAGGCCATTGTTTTCATCCGACAACATCAACTGCAATAAACATAAGATGGAGAGATTTCTACATCATGGACGGTTTTCTGTTGCCTCTGTATATGCTCCGATTTGCTTCCCTCCACTTCCTCTAATTGTTTTGAAGAACAGAGATGGTGAGCAGCCTGCCATTGCTGCTGTAGGTTCACTAAAAAGTGTGGATCCAGATCGAATCATACTGAAGAAAATTGTTTTGACGGGGTATCCACAGAGAGTCTCAAAACTGAAAGCGATTGTGCGGTACATGTTCCACAATCCTGAAGATGTCAAATGGTTCAAGCCCGTTGAGTTGTGGACAAAACATGGACGCCGTGGCCGGATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAGTGCATATTCAACAGCAGCATACAGCAGCATGATACCGTGTGCATGAGCTTGTTTAAACGCGCATACCCAAAGTGGCCTGAACAGCTGTACCATGTGTGA |
| Protein: MGGGRAQVNKAHKTRFASKASRHAHKIDKVRSGKPESSHRAAVKGARAARIQQSKAIRDKKRAALLKEKRSSVGSSGAPRVIVLVGLSSSTDVGSLAKDLLTFAEGDDGKLRSSTVASPTYKLRTTVLQAPYGDLTSCMELAKVADLLAFVLPANSLYSSDSSSPIDEFGSQCLSVFRAMGLPSTAVFIRDLPADNRSRQELKKAATSFLSAELPEDCKFYLADTKDDLHKFMWLFKEQHLSSPHWRNQRPYVMSEQICIKPDDNTGLCTLLVSGYLRAHNLSVNQLVHVSGAGDFQLGQIDVLKDPCPLCERKSSDVMETEDDGIQIVNTFVSDPSNQEPLLVENVPDPLAGEQTWPTEEDMKEANINNKERKLVKRKLPRGTSEYQAAWIVDDTDDEDNDSDNDNQAGSGMVIDEQGHADEGSDGSDIDAVSHFTEKFDTETVGDTEMADDENLTKEQIEAEIKKIKEANTEDEEFPDEVETPLDVPAKKRFAKYRGLKSFRTSTWDPKESLPPDYARIFAFDNFTRTQKHVLAKIAELDGGTKDCALVGSYVRLYVTNVPTDIASKLCHPSRRIPVVVSGLLQHESKMSVLHFSIKKHDSYEAPIKSKEPLIFNVGFRQFTARPLFSSDNINCNKHKMERFLHHGRFSVASVYAPICFPPLPLIVLKNRDGEQPAIAAVGSLKSVDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVKWFKPVELWTKHGRRGRIKETVGTHGAMKCIFNSSIQQHDTVCMSLFKRAYPKWPEQLYHV |